ANGSD is a software for analyzing next generation sequencing data.
A fast D-Statistics computation program
gemBS-rs is a rewrite of the gemBS pipeline using Rust. gemBS itself is a powerful high-throughput pipeline for DNA Methylation sequencing analysis.
A Program for Ultrafast RNA-seq Sequence Alignments
A Low-Memory Footprint Genetic Sequence Alignment Tool
An Ultra-Fast Alignment Program for Genomic and Protein Sequence Data
A Program for Aligning Multiple Sets of Genetic Sequence Data
Aligning Multiple Genome Sequences with Large-Scale Evolutionary Events
A Bayesian MCMC Program for Inferring Phylogenetic Models
An Interpolated Markov Model Algorithm for Gene Finding in Microbial Genomes