ANGSD is a software for analyzing next generation sequencing data.

A fast D-Statistics computation program

gemBS-rs is a rewrite of the gemBS pipeline using Rust. gemBS itself is a powerful high-throughput pipeline for DNA Methylation sequencing analysis.

A Program for Ultrafast RNA-seq Sequence Alignments

A Low-Memory Footprint Genetic Sequence Alignment Tool

An Ultra-Fast Alignment Program for Genomic and Protein Sequence Data

A Program for Aligning Multiple Sets of Genetic Sequence Data

Aligning Multiple Genome Sequences with Large-Scale Evolutionary Events

A Bayesian MCMC Program for Inferring Phylogenetic Models

An Interpolated Markov Model Algorithm for Gene Finding in Microbial Genomes